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  5. evm.model.contig_4432.12

evm.model.contig_4432.12


Description : (at3g16565 : 155.0) alanine-tRNA ligases;nucleic acid binding;ligases, forming aminoacyl-tRNA and related compounds;nucleotide binding;ATP binding; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, alanine-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation, tRNA aminoacylation, translation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase (TAIR:AT1G50200.1); Has 8903 Blast hits to 8903 proteins in 2729 species: Archae - 421; Bacteria - 5979; Metazoa - 328; Fungi - 222; Plants - 105; Viruses - 0; Other Eukaryotes - 1848 (source: NCBI BLink). & (reliability: 310.0) & (original description: no original description)


Gene families : OG_42_0009401 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009401_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4432.12
Cluster HCCA clusters: Cluster_26


Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0043039 tRNA aminoacylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004057 arginyltransferase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
InterPro domains Description Start Stop
IPR012947 tRNA_SAD 243 273
No external refs found!