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Description : (at3g19950 : 80.5) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G55530.1); Has 11106 Blast hits to 11075 proteins in 297 species: Archae - 0; Bacteria - 6; Metazoa - 2940; Fungi - 1152; Plants - 5266; Viruses - 73; Other Eukaryotes - 1669 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description)
Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Porphyridium release: evm.model.contig_4465.8 | |
| Cluster | HCCA clusters: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At3g56580 | No alias | E3 ubiquitin-protein ligase RZF1... | 0.02 | Orthogroups_2024-Update | |
| Bradi4g15190 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.G01814.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G053210 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Glyma.13G072900 | No alias | RING-H2 finger C1A | 0.02 | Orthogroups_2024-Update | |
| LOC_Os09g06740 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.01 | Orthogroups_2024-Update | |
| LOC_Os11g04690 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.01 | Orthogroups_2024-Update | |
| LOC_Os12g04090 | No alias | zinc finger, C3HC4 type domain containing protein | 0.01 | Orthogroups_2024-Update | |
| LOC_Os12g04450 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| PSME_00035855-RA | No alias | (at5g01980 : 155.0) RING/U-box superfamily protein;... | 0.01 | Orthogroups_2024-Update | |
| Potri.012G036700 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Potri.015G028400 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Sobic.004G074600.2 | No alias | Unknown function | 0.07 | Orthogroups_2024-Update | |
| Solyc09g074460 | No alias | RING/U-box superfamily protein (AHRD V3.3 *-* AT5G01980.1) | 0.04 | Orthogroups_2024-Update | |
| Sopen09g029310 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0009916 | alternative oxidase activity | IEP | Predicted GO |
| BP | GO:0015074 | DNA integration | IEP | Predicted GO |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Predicted GO |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 105 | 146 |
| No external refs found! |