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  5. evm.model.contig_448.24

evm.model.contig_448.24


Description : (at1g10840 : 206.0) Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1).; translation initiation factor 3 subunit H1 (TIF3H1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 412.0) & (original description: no original description)


Gene families : OG_42_0004793 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004793_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_448.24
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
153526 No alias translation initiation factor 3 subunit H1 0.02 Orthogroups_2024-Update
A4A49_14445 No alias eukaryotic translation initiation factor 3 subunit h 0.02 Orthogroups_2024-Update
A4A49_57155 No alias eukaryotic translation initiation factor 3 subunit h 0.03 Orthogroups_2024-Update
Bradi5g07240 No alias translation initiation factor 3 subunit H1 0.02 Orthogroups_2024-Update
Cre16.g676314 No alias translation initiation factor 3 subunit H1 0.04 Orthogroups_2024-Update
HORVU2Hr1G068360.8 No alias component *(eIF3h) of eIF3 mRNA-to-PIC binding complex 0.02 Orthogroups_2024-Update
MA_32338g0010 No alias (at1g10840 : 451.0) Encodes eukaryotic initiation factor... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006743 ubiquinone metabolic process IEP Predicted GO
BP GO:0006744 ubiquinone biosynthetic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042181 ketone biosynthetic process IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901661 quinone metabolic process IEP Predicted GO
BP GO:1901663 quinone biosynthetic process IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 1 103
No external refs found!