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  5. evm.model.contig_4493.3

evm.model.contig_4493.3


Description : "(at2g38880 : 160.0) Encodes a transcription factor from the nuclear factor Y (NF-Y) family, AtNF-YB1. Confers drought tolerance.; ""nuclear factor Y, subunit B1"" (NF-YB1); CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Histone-fold (InterPro:IPR009072), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B8 (TAIR:AT2G37060.3). & (p25209|nfyb_maize : 155.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (reliability: 320.0) & (original description: no original description)"


Gene families : OG_42_0000232 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000232_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4493.3
Cluster HCCA clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Bradi3g15670 No alias nuclear factor Y, subunit B3 0.01 Orthogroups_2024-Update
HORVU7Hr1G105500.6 No alias component *(NF-YB) of NF-Y transcription factor complex 0.02 Orthogroups_2024-Update
Potri.006G005500 No alias nuclear factor Y, subunit B3 0.01 Orthogroups_2024-Update
Potri.016G005600 No alias nuclear factor Y, subunit B6 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000334 3-hydroxyanthranilate 3,4-dioxygenase activity IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 19 82
No external refs found!