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  5. evm.model.contig_537.5

evm.model.contig_537.5


Description : (q5vrg3|psa4b_orysa : 334.0) Proteasome subunit alpha type 4-2 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) - Oryza sativa (Rice) & (at3g22110 : 332.0) Encodes the alpha-3 subunit of 20s proteasome.; 20S proteasome alpha subunit C1 (PAC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G15165.1); Has 7432 Blast hits to 7428 proteins in 553 species: Archae - 896; Bacteria - 261; Metazoa - 2465; Fungi - 1789; Plants - 945; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (reliability: 664.0) & (original description: no original description)


Gene families : OG_42_0003706 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003706_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_537.5
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
A4A49_16289 No alias proteasome subunit alpha type-4 0.02 Orthogroups_2024-Update
Cre10.g418100 No alias 20S proteasome alpha subunit C1 0.02 Orthogroups_2024-Update
Glyma.07G155700 No alias 20S proteasome alpha subunit C1 0.02 Orthogroups_2024-Update
Glyma.18G206200 No alias 20S proteasome alpha subunit C1 0.01 Orthogroups_2024-Update
HORVU7Hr1G027220.3 No alias alpha-type-3 component *(PAC) of 26S proteasome & EC_3.4... 0.02 Orthogroups_2024-Update
LOC_Os06g07978 No alias peptidase, T1 family, putative, expressed 0.01 Orthogroups_2024-Update
MA_474079g0010 No alias (p52427|psa4_spiol : 350.0) Proteasome subunit alpha... 0.01 Orthogroups_2024-Update
Potri.006G008800 No alias 20S proteasome alpha subunit C1 0.01 Orthogroups_2024-Update
Sobic.010G054200.1 No alias alpha-type-3 component *(PAC) of 26S proteasome & EC_3.4... 0.01 Orthogroups_2024-Update
evm.model.tig00020965.21 No alias (p52427|psa4_spiol : 337.0) Proteasome subunit alpha... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA InterProScan predictions
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan predictions
CC GO:0005839 proteasome core complex IEA InterProScan predictions
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA InterProScan predictions
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 5 27
IPR001353 Proteasome_sua/b 30 214
No external refs found!