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  5. evm.model.contig_827.1

evm.model.contig_827.1


Description : (at5g16070 : 650.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, zeta subunit (InterPro:IPR012722), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G02530.1); Has 18279 Blast hits to 17892 proteins in 3676 species: Archae - 807; Bacteria - 8603; Metazoa - 2077; Fungi - 1456; Plants - 829; Viruses - 0; Other Eukaryotes - 4507 (source: NCBI BLink). & (p54411|tcpe2_avesa : 224.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1300.0) & (original description: no original description)


Gene families : OG_42_0004744 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004744_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_827.1
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Bradi3g04130 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Brara.C00706.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.01 Orthogroups_2024-Update
Brara.E03569.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.02 Orthogroups_2024-Update
Cre09.g397200 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Glyma.18G298100 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G091690.4 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.03 Orthogroups_2024-Update
Kfl00177_0050 kfl00177_0050_v1.1 (at3g02530 : 867.0) TCP-1/cpn60 chaperonin family... 0.02 Orthogroups_2024-Update
Mp8g07530.1 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.03 Orthogroups_2024-Update
Pp1s138_31V6 No alias F16B3.16; chaperonin, putative [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.3G039600.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.03 Orthogroups_2024-Update
Sobic.002G423500.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.03 Orthogroups_2024-Update
Solyc02g063090 No alias T-complex protein 1 subunit zeta 1 (AHRD V3.3 *** TCPZA_ARATH) 0.03 Orthogroups_2024-Update
Solyc02g085790 No alias T-complex protein 1 subunit zeta 1 (AHRD V3.3 *** TCPZA_ARATH) 0.02 Orthogroups_2024-Update
Sopen02g030480 No alias TCP-1/cpn60 chaperonin family 0.02 Orthogroups_2024-Update
evm.model.tig00000789.37 No alias (at3g02530 : 621.0) TCP-1/cpn60 chaperonin family... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006493 protein O-linked glycosylation IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008531 riboflavin kinase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 29 527
No external refs found!