Coexpression cluster: Cluster_8 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034660 ncRNA metabolic process 7.69% (11/143) 2.92 0.0 6.3e-05
GO:0005488 binding 36.36% (52/143) 0.88 2e-06 0.000401
GO:0016070 RNA metabolic process 10.49% (15/143) 2.01 4e-06 0.00048
GO:0003676 nucleic acid binding 15.38% (22/143) 1.44 1.6e-05 0.000917
GO:0003674 molecular_function 51.05% (73/143) 0.59 1.4e-05 0.000951
GO:0006399 tRNA metabolic process 5.59% (8/143) 2.85 1.3e-05 0.001173
GO:0043038 amino acid activation 4.2% (6/143) 3.17 4.6e-05 0.001475
GO:0043039 tRNA aminoacylation 4.2% (6/143) 3.17 4.6e-05 0.001475
GO:0004812 aminoacyl-tRNA ligase activity 4.2% (6/143) 3.17 4.6e-05 0.001475
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.2% (6/143) 3.17 4.6e-05 0.001475
GO:0003723 RNA binding 6.99% (10/143) 2.25 4.5e-05 0.002272
GO:0140098 catalytic activity, acting on RNA 6.29% (9/143) 2.27 9.8e-05 0.002851
GO:0006139 nucleobase-containing compound metabolic process 12.59% (18/143) 1.38 0.000173 0.004651
GO:0006725 cellular aromatic compound metabolic process 13.29% (19/143) 1.32 0.000202 0.004706
GO:0016874 ligase activity 4.9% (7/143) 2.53 0.000198 0.004949
GO:0140101 catalytic activity, acting on a tRNA 4.2% (6/143) 2.73 0.000268 0.005211
GO:0006418 tRNA aminoacylation for protein translation 3.5% (5/143) 3.06 0.000294 0.005415
GO:0097159 organic cyclic compound binding 23.78% (34/143) 0.87 0.000268 0.005514
GO:1901363 heterocyclic compound binding 23.78% (34/143) 0.87 0.000268 0.005514
GO:1901360 organic cyclic compound metabolic process 13.29% (19/143) 1.26 0.000316 0.005531
GO:0090304 nucleic acid metabolic process 10.49% (15/143) 1.41 0.000487 0.00811
GO:0006520 cellular amino acid metabolic process 4.9% (7/143) 2.27 0.000602 0.00958
GO:0046483 heterocycle metabolic process 12.59% (18/143) 1.22 0.000638 0.009716
GO:0044281 small molecule metabolic process 7.69% (11/143) 1.66 0.000727 0.010596
GO:0034641 cellular nitrogen compound metabolic process 13.99% (20/143) 1.11 0.000875 0.012255
GO:0034470 ncRNA processing 3.5% (5/143) 2.67 0.001067 0.01437
GO:0043436 oxoacid metabolic process 5.59% (8/143) 1.93 0.00119 0.014875
GO:0006082 organic acid metabolic process 5.59% (8/143) 1.93 0.00119 0.014875
GO:0042455 ribonucleoside biosynthetic process 1.4% (2/143) 4.87 0.001707 0.018099
GO:1901659 glycosyl compound biosynthetic process 1.4% (2/143) 4.87 0.001707 0.018099
GO:0009163 nucleoside biosynthetic process 1.4% (2/143) 4.87 0.001707 0.018099
GO:0006414 translational elongation 1.4% (2/143) 4.87 0.001707 0.018099
GO:0003746 translation elongation factor activity 1.4% (2/143) 4.87 0.001707 0.018099
GO:0019752 carboxylic acid metabolic process 4.9% (7/143) 1.78 0.004226 0.043498
GO:0016072 rRNA metabolic process 2.1% (3/143) 3.13 0.004521 0.043954
GO:0006364 rRNA processing 2.1% (3/143) 3.13 0.004521 0.043954
GO:0008135 translation factor activity, RNA binding 2.1% (3/143) 3.06 0.005209 0.049275
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_26 0.047 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_96 0.035 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_102 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_205 0.026 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_29 0.039 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_110 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_115 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_122 0.025 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_177 0.026 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_199 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_231 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_6 0.044 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_56 0.023 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_15 0.033 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_26 0.045 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_32 0.022 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_83 0.029 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_99 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_13 0.025 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_40 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_95 0.027 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_109 0.027 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_59 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_82 0.028 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_137 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_184 0.044 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_225 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_259 0.019 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_271 0.026 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_18 0.034 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_79 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_81 0.023 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_117 0.021 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_216 0.022 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_184 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_235 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_59 0.074 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_188 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_109 0.046 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_154 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_170 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_289 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_385 0.033 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_444 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_459 0.022 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_13 0.038 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_23 0.025 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_47 0.026 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_108 0.025 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_73 0.028 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_225 0.028 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0075 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0027 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0036 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0083 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0096 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0106 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0118 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0132 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_8 0.034 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_10 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_24 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_32 0.034 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_58 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_91 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_124 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_265 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_301 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_326 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_16 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_28 0.036 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_107 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_117 0.034 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_183 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_206 0.028 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_297 0.032 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_302 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_24 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_43 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_66 0.047 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_75 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_135 0.026 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_164 0.027 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_45 0.046 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_54 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_56 0.031 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_75 0.053 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_122 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_191 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_11 0.035 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_22 0.036 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_26 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_36 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_114 0.028 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_118 0.022 Orthogroups_2024-Update Compare
Sequences (143) (download table)

InterPro Domains

GO Terms

Family Terms