Description : mitochondrial editing factor 22
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Selaginella: 101455 | |
Cluster | HCCA clusters: Cluster_187 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g00491 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi2g62180 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Brara.A00983.1 | No alias | RNA editing factor *(DOT4) | 0.02 | Orthogroups_2024-Update | |
Glyma.04G129100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G086500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.11G213300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Pp1s169_110V6 | No alias | T12J13.14; pentatricopeptide (PPR) repeat-containing... | 0.01 | Orthogroups_2024-Update | |
Seita.1G237400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.2G091900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.5G361000.1 | No alias | RNA editing factor *(MEF10) | 0.03 | Orthogroups_2024-Update | |
Sobic.002G007000.2 | No alias | RNA editing factor *(ELI1) | 0.03 | Orthogroups_2024-Update | |
Sobic.003G223000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.009G241200.3 | No alias | RNA editing factor *(ECB2/VAC1) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 502 | 625 |
IPR002885 | Pentatricopeptide_repeat | 223 | 270 |
IPR002885 | Pentatricopeptide_repeat | 122 | 165 |
IPR002885 | Pentatricopeptide_repeat | 405 | 426 |
IPR002885 | Pentatricopeptide_repeat | 197 | 222 |
IPR002885 | Pentatricopeptide_repeat | 297 | 324 |
IPR002885 | Pentatricopeptide_repeat | 325 | 353 |
No external refs found! |