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  5. 108616

108616


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 108616
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Potri.014G087100 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 772 889
IPR002885 Pentatricopeptide_repeat 65 86
IPR002885 Pentatricopeptide_repeat 366 390
IPR002885 Pentatricopeptide_repeat 493 539
IPR002885 Pentatricopeptide_repeat 292 336
IPR002885 Pentatricopeptide_repeat 393 439
IPR002885 Pentatricopeptide_repeat 596 643
IPR002885 Pentatricopeptide_repeat 90 138
IPR002885 Pentatricopeptide_repeat 191 239
No external refs found!