Description : RING/U-box superfamily protein
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Selaginella: 109459 | |
Cluster | HCCA clusters: Cluster_172 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At5g07040 | No alias | Putative RING-H2 finger protein ATL69... | 0.02 | Orthogroups_2024-Update | |
Brara.C03092.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Glyma.03G017500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.20G187900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g37740 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g11860 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.01 | Orthogroups_2024-Update | |
MA_227897g0010 | No alias | (at3g16720 : 112.0) RING-H2 protein induced after... | 0.03 | Orthogroups_2024-Update | |
Mp1g27170.1 | No alias | RING-H2-class E3 ligase | 0.04 | Orthogroups_2024-Update | |
Seita.7G205000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Solyc06g061250 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000726 | non-recombinational repair | IEP | Predicted GO |
MF | GO:0003678 | DNA helicase activity | IEP | Predicted GO |
MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Predicted GO |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004386 | helicase activity | IEP | Predicted GO |
MF | GO:0005215 | transporter activity | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Predicted GO |
BP | GO:0006810 | transport | IEP | Predicted GO |
BP | GO:0006814 | sodium ion transport | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
MF | GO:0008026 | ATP-dependent helicase activity | IEP | Predicted GO |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
BP | GO:0008150 | biological_process | IEP | Predicted GO |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
CC | GO:0016021 | integral component of membrane | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
BP | GO:0016485 | protein processing | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0016887 | ATPase activity | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
MF | GO:0022804 | active transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
CC | GO:0031224 | intrinsic component of membrane | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
MF | GO:0042623 | ATPase activity, coupled | IEP | Predicted GO |
MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEP | Predicted GO |
MF | GO:0043492 | ATPase activity, coupled to movement of substances | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
BP | GO:0051179 | localization | IEP | Predicted GO |
BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
BP | GO:0051604 | protein maturation | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Predicted GO |
MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Predicted GO |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 64 | 108 |
No external refs found! |