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  5. 110549

110549


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0010200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 110549
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Kfl00414_0100 kfl00414_0100_v1.1 (at5g02860 : 187.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 189 232
IPR002885 Pentatricopeptide_repeat 85 113
IPR002885 Pentatricopeptide_repeat 269 291
IPR002885 Pentatricopeptide_repeat 57 77
IPR002885 Pentatricopeptide_repeat 163 188
No external refs found!