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  5. 113819

113819


Description : VIRB2-interacting protein 2


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 113819
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
96839 No alias Reticulon family protein 0.05 Orthogroups_2024-Update
Brara.A01374.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Glyma.03G076200 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
Glyma.07G097100 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
MA_10432084g0010 No alias (at3g10915 : 152.0) Reticulon family protein; INVOLVED... 0.04 Orthogroups_2024-Update
MA_654072g0010 No alias (at3g61560 : 207.0) Reticulon family protein; CONTAINS... 0.04 Orthogroups_2024-Update
PSME_00019419-RA No alias (at3g10260 : 207.0) Reticulon family protein; CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00026571-RA No alias (at3g10260 : 227.0) Reticulon family protein; CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00042713-RA No alias (at3g10915 : 156.0) Reticulon family protein; INVOLVED... 0.02 Orthogroups_2024-Update
Pp1s421_1V6 No alias seed maturation protein 0.02 Orthogroups_2024-Update
Seita.2G029000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Sopen08g030030 No alias Reticulon 0.02 Orthogroups_2024-Update
Sopen12g002240 No alias Reticulon 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 46 211
No external refs found!