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  4. Sequence
  5. 133828

133828


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0009312 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009312_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 133828
Cluster HCCA clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
90172 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
92725 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 69 98
IPR002885 Pentatricopeptide_repeat 267 297
IPR002885 Pentatricopeptide_repeat 339 363
IPR002885 Pentatricopeptide_repeat 7 33
IPR002885 Pentatricopeptide_repeat 238 259
IPR002885 Pentatricopeptide_repeat 303 327
IPR002885 Pentatricopeptide_repeat 100 129
IPR002885 Pentatricopeptide_repeat 38 62
No external refs found!