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  5. 154776

154776


Description : starch synthase 3


Gene families : OG_42_0001050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001050_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Selaginella: 154776
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Bradi5g22310 No alias starch synthase 3 0.03 Orthogroups_2024-Update
GRMZM2G130043 No alias UDP-Glycosyltransferase superfamily protein 0.03 Orthogroups_2024-Update
Kfl00674_0060 kfl00674_0060_v1.1 (at4g18240 : 422.0) starch synthase 4 (SS4); FUNCTIONS... 0.02 Orthogroups_2024-Update
Mp2g20000.1 No alias starch synthase (SSIII) 0.02 Orthogroups_2024-Update
Pp1s2_195V6 No alias soluble starch synthase iv-2 0.02 Orthogroups_2024-Update
Seita.3G167300.1 No alias starch synthase *(SS4) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR005085 CBM25 17 96
IPR005085 CBM25 354 441
IPR005085 CBM25 192 279
IPR013534 Starch_synth_cat_dom 453 639
IPR001296 Glyco_trans_1 701 857
No external refs found!