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  5. 171427

171427


Description : expansin B3


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 171427
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Bradi3g33130 No alias expansin B2 0.02 Orthogroups_2024-Update
Brara.K00035.1 No alias beta-class expansin 0.03 Orthogroups_2024-Update
MA_10427897g0010 No alias (q7x6j9|exb17_orysa : 304.0) Expansin-B17 precursor... 0.02 Orthogroups_2024-Update
MA_166764g0010 No alias (q7x6j9|exb17_orysa : 194.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
MA_78155g0010 No alias (q7x6j9|exb17_orysa : 256.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00003968-RA No alias (q7x6j9|exb17_orysa : 259.0) Expansin-B17 precursor... 0.02 Orthogroups_2024-Update
PSME_00037643-RA No alias (q6h676|exb11_orysa : 193.0) Expansin-B11 precursor... 0.03 Orthogroups_2024-Update
Potri.019G101900 No alias expansin B3 0.02 Orthogroups_2024-Update
Pp1s147_37V6 No alias beta-expansin 3 0.02 Orthogroups_2024-Update
Pp1s251_59V6 No alias beta-expansin 3 0.04 Orthogroups_2024-Update
Pp1s313_58V6 No alias beta-expansin 3 0.03 Orthogroups_2024-Update
Sobic.001G155700.5 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G301300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G294400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G294500.1 No alias PNP precursor polypeptide 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 134 218
IPR009009 RlpA-like_DPBB 41 121
No external refs found!