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  5. 172051

172051


Description : pre-mRNA splicing factor-related


Gene families : OG_42_0003515 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003515_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 172051
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Cre14.g633650 No alias pre-mRNA splicing factor-related 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010491 PRP1_N 19 195
No external refs found!