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  5. 178232

178232


Description : GDP-D-mannose 3\',5\'-epimerase


Gene families : OG_42_0001968 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001968_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 178232
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Brara.F02912.1 No alias GDP-D-mannose-epimerase *(GME) & EC_5.1 racemase or epimerase 0.02 Orthogroups_2024-Update
PSME_00003917-RA No alias "(q2r1v8|gme2_orysa : 605.0) GDP-mannose 3,5-epimerase 2... 0.02 Orthogroups_2024-Update
PSME_00010895-RA No alias "(at5g28840 : 704.0) Encodes a protein with... 0.03 Orthogroups_2024-Update
PSME_00041207-RA No alias "(q338b5|gme1_orysa : 587.0) GDP-mannose 3,5-epimerase 1... 0.02 Orthogroups_2024-Update
Pp1s98_250V6 No alias gdp-mannose 3 -epimerase 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 27 265
No external refs found!