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  5. 17953

17953


Description : Mannose-binding lectin superfamily protein


Gene families : OG_42_0000123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 17953
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g26560 No alias dirigent, putative 0.02 Orthogroups_2024-Update
PSME_00031601-RA No alias (at1g52100 : 101.0) Mannose-binding lectin superfamily... 0.03 Orthogroups_2024-Update
PSME_00053562-RA No alias (at1g19715 : 85.9) Mannose-binding lectin superfamily... 0.03 Orthogroups_2024-Update
Seita.5G337600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G040500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G372400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G168800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 7 131
No external refs found!