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  5. 180500

180500


Description : Methylthiotransferase


Gene families : OG_42_0006567 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006567_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 180500
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Bradi4g14840 No alias Methylthiotransferase 0.02 Orthogroups_2024-Update
Pp1s25_71V6 No alias cdk5 regulatory subunit associated protein 1 0.02 Orthogroups_2024-Update
Sobic.005G169900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen02g029420 No alias Radical SAM superfamily 0.02 Orthogroups_2024-Update
evm.model.tig00021521.24 No alias (q2r1u4|ck5p1_orysa : 482.0) CDK5RAP1-like protein -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0051536 iron-sulfur cluster binding IEA InterProScan predictions
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR002792 TRAM_dom 384 456
IPR013848 Methylthiotransferase_N 1 100
IPR007197 rSAM 148 327
No external refs found!