227198


Description : Ribosomal protein L18ae/LX family protein


Gene families : OG_42_0001510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001510_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 227198
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
A4A49_41727 No alias 60s ribosomal protein l18a 0.07 Orthogroups_2024-Update
A4A49_56604 No alias 60s ribosomal protein l18a 0.05 Orthogroups_2024-Update
At2g34480 No alias Ribosomal protein L18ae/LX family protein... 0.04 Orthogroups_2024-Update
At3g14600 No alias 60S ribosomal protein L18a-3... 0.02 Orthogroups_2024-Update
Bradi2g16430 No alias Ribosomal protein L18ae/LX family protein 0.16 Orthogroups_2024-Update
Bradi2g46010 No alias Ribosomal protein L18ae/LX family protein 0.14 Orthogroups_2024-Update
Bradi2g50020 No alias Ribosomal protein L18ae/LX family protein 0.09 Orthogroups_2024-Update
Brara.C01744.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Brara.D02096.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.17 Orthogroups_2024-Update
Brara.E00977.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Brara.E02666.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Cre01.g047750 No alias Ribosomal protein L18ae/LX family protein 0.12 Orthogroups_2024-Update
GRMZM2G022619 No alias Ribosomal protein L18ae/LX family protein 0.14 Orthogroups_2024-Update
Glyma.02G284900 No alias Ribosomal protein L18ae/LX family protein 0.05 Orthogroups_2024-Update
Glyma.14G029901 No alias Ribosomal protein L18ae/LX family protein 0.12 Orthogroups_2024-Update
Glyma.15G095400 No alias Ribosomal protein L18ae/LX family protein 0.09 Orthogroups_2024-Update
Glyma.18G110000 No alias Ribosomal protein L18ae/LX family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G088040.2 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Kfl00905_0040 kfl00905_0040_v1.1 (at2g34480 : 295.0) Ribosomal protein L18ae/LX family... 0.07 Orthogroups_2024-Update
LOC_Os01g47660 No alias 60S ribosomal protein L18a, putative, expressed 0.06 Orthogroups_2024-Update
LOC_Os05g49030 No alias 60S ribosomal protein L18a, putative, expressed 0.03 Orthogroups_2024-Update
MA_12029g0010 No alias (q943f3|rl18a_orysa : 339.0) 60S ribosomal protein L18a... 0.06 Orthogroups_2024-Update
Mp1g17730.1 No alias component RPL18a of LSU proteome component 0.12 Orthogroups_2024-Update
Potri.002G057600 No alias Ribosomal protein L18ae/LX family protein 0.11 Orthogroups_2024-Update
Potri.004G063400 No alias Ribosomal protein L18ae/LX family protein 0.06 Orthogroups_2024-Update
Pp1s184_111V6 No alias 60s ribosomal protein l18a 0.15 Orthogroups_2024-Update
Pp1s44_13V6 No alias 60s ribosomal protein l18a 0.15 Orthogroups_2024-Update
Pp1s56_243V6 No alias 60s ribosomal protein l18a 0.08 Orthogroups_2024-Update
Pp1s74_193V6 No alias 60s ribosomal protein l18a 0.18 Orthogroups_2024-Update
Seita.3G145500.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Seita.5G262600.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Seita.8G085600.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.003G249700.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Sobic.005G091700.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Sobic.009G233400.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Solyc02g070640 No alias 60S ribosomal protein L18a (AHRD V3.3 *** Q3HRW8_SOLTU) 0.2 Orthogroups_2024-Update
Solyc02g070650 No alias 60S ribosomal protein L18a (AHRD V3.3 *** Q3HRW8_SOLTU) 0.19 Orthogroups_2024-Update
Solyc06g065590 No alias 60S ribosomal protein L18a (AHRD V3.3 *** K4C7I8_SOLLC) 0.08 Orthogroups_2024-Update
Solyc08g016180 No alias 60S ribosomal protein L18a (AHRD V3.3 *** K4CJE2_SOLLC) 0.17 Orthogroups_2024-Update
Sopen02g019720 No alias Ribosomal L18ae/LX protein domain 0.03 Orthogroups_2024-Update
Sopen02g019730 No alias Ribosomal L18ae/LX protein domain 0.1 Orthogroups_2024-Update
Sopen06g024090 No alias Ribosomal L18ae/LX protein domain 0.1 Orthogroups_2024-Update
Sopen08g006530 No alias Ribosomal L18ae/LX protein domain 0.26 Orthogroups_2024-Update
evm.model.contig_448.2 No alias (q943f3|rl18a_orysa : 186.0) 60S ribosomal protein L18a... 0.22 Orthogroups_2024-Update
evm.model.tig00000615.59 No alias (at1g29970 : 221.0) 60S ribosomal protein L18A-1;... 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0003724 RNA helicase activity IEP Predicted GO
MF GO:0004004 ATP-dependent RNA helicase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0007088 regulation of mitotic nuclear division IEP Predicted GO
BP GO:0007346 regulation of mitotic cell cycle IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008186 RNA-dependent ATPase activity IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
BP GO:0033045 regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0051783 regulation of nuclear division IEP Predicted GO
BP GO:0051983 regulation of chromosome segregation IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901987 regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1905818 regulation of chromosome separation IEP Predicted GO
InterPro domains Description Start Stop
IPR023573 Ribosomal_L18a//L18Ae/LX 6 127
No external refs found!