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  5. 227280

227280


Description : polyubiquitin 10


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 227280
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
A4A49_39502 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
At5g37640 No alias Polyubiquitin 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHQ6] 0.02 Orthogroups_2024-Update
MA_6985771g0010 No alias (at5g03240 : 211.0) encodes ubiquitin that is attached... 0.03 Orthogroups_2024-Update
MA_93495g0010 No alias (at4g05320 : 654.0) One of five polyubiquitin genes in... 0.02 Orthogroups_2024-Update
Mp4g02730.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Potri.011G026600 No alias polyubiquitin 3 0.02 Orthogroups_2024-Update
Potri.011G134200 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Pp1s100_236V6 No alias T8F5.13; polyubiquitin, putative [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s127_93V6 No alias polyubiquitin 2 0.02 Orthogroups_2024-Update
Pp1s175_73V6 No alias polyubiquitin 0.02 Orthogroups_2024-Update
Sobic.010G239500.6 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 383 454
IPR000626 Ubiquitin_dom 459 530
IPR000626 Ubiquitin_dom 611 682
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 307 378
IPR000626 Ubiquitin_dom 535 606
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 155 226
No external refs found!