228163

Description : Ribosomal protein S8 family protein

Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Selaginella: 228163
Cluster	HCCA clusters: Cluster_87

Target	Alias	Description	ECC score	Gene Family Method
At5g59850	No alias	AT1G07770 protein [Source:UniProtKB/TrEMBL;Acc:B9DI04]	0.08	Orthogroups_2024-Update
Bradi2g23110	No alias	ribosomal protein S15A	0.14	Orthogroups_2024-Update
Bradi2g54450	No alias	ribosomal protein S15A	0.15	Orthogroups_2024-Update
Brara.B01062.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.1	Orthogroups_2024-Update
Brara.C01067.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.19	Orthogroups_2024-Update
Brara.F00468.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.11	Orthogroups_2024-Update
Brara.H02910.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Brara.J01354.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Cre05.g234637	No alias	Ribosomal protein S8 family protein	0.2	Orthogroups_2024-Update
GRMZM2G083497	No alias	ribosomal protein S15A	0.09	Orthogroups_2024-Update
Glyma.01G240000	No alias	ribosomal protein S15A	0.03	Orthogroups_2024-Update
Glyma.07G255500	No alias	ribosomal protein S15A	0.09	Orthogroups_2024-Update
Glyma.11G003600	No alias	ribosomal protein S15A	0.09	Orthogroups_2024-Update
Glyma.11G003700	No alias	ribosomal protein S15A	0.09	Orthogroups_2024-Update
Glyma.15G102550	No alias	ribosomal protein S15A	0.05	Orthogroups_2024-Update
Glyma.17G018600	No alias	ribosomal protein S15A	0.12	Orthogroups_2024-Update
HORVU1Hr1G072060.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
HORVU3Hr1G086930.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Kfl00864_0040	kfl00864_0040_v1.1	(at5g59850 : 230.0) Ribosomal protein S8 family protein;...	0.09	Orthogroups_2024-Update
LOC_Os02g27760	No alias	40S ribosomal protein S15a, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g10720	No alias	40S ribosomal protein S15a, putative, expressed	0.06	Orthogroups_2024-Update
MA_10427318g0020	No alias	(at3g46040 : 214.0) Regulated by TCP20.; ribosomal...	0.05	Orthogroups_2024-Update
MA_57835g0010	No alias	(at3g46040 : 223.0) Regulated by TCP20.; ribosomal...	0.13	Orthogroups_2024-Update
MA_82191g0010	No alias	(at3g46040 : 223.0) Regulated by TCP20.; ribosomal...	0.04	Orthogroups_2024-Update
Mp8g06510.1	No alias	component RPS15a of SSU proteome	0.05	Orthogroups_2024-Update
Mp8g13010.1	No alias	component RPS15a of SSU proteome	0.07	Orthogroups_2024-Update
PSME_00001830-RA	No alias	(at5g59850 : 244.0) Ribosomal protein S8 family protein;...	0.04	Orthogroups_2024-Update
PSME_00015526-RA	No alias	(at5g59850 : 244.0) Ribosomal protein S8 family protein;...	0.07	Orthogroups_2024-Update
Potri.001G118100	No alias	ribosomal protein S15A	0.11	Orthogroups_2024-Update
Potri.010G208700	No alias	Ribosomal protein S8 family protein	0.05	Orthogroups_2024-Update
Pp1s115_101V6	No alias	40s ribosomal protein s15a	0.11	Orthogroups_2024-Update
Pp1s1_304V6	No alias	40s ribosomal protein s15a	0.07	Orthogroups_2024-Update
Pp1s426_18V6	No alias	40s ribosomal protein s15a	0.08	Orthogroups_2024-Update
Pp1s45_88V6	No alias	40s ribosomal protein s15a	0.06	Orthogroups_2024-Update
Pp1s61_209V6	No alias	40s ribosomal protein s15a	0.03	Orthogroups_2024-Update
Seita.2G319400.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.17	Orthogroups_2024-Update
Seita.5G374600.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Seita.8G174900.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Sobic.003G012700.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.11	Orthogroups_2024-Update
Sobic.007G212600.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.18	Orthogroups_2024-Update
Sopen04g025860	No alias	Ribosomal protein S8	0.11	Orthogroups_2024-Update
Sopen04g026010	No alias	Ribosomal protein S8	0.04	Orthogroups_2024-Update
Sopen04g026020	No alias	Ribosomal protein S8	0.17	Orthogroups_2024-Update
evm.model.contig_2045.5	No alias	(at5g59850 : 190.0) Ribosomal protein S8 family protein;...	0.2	Orthogroups_2024-Update
evm.model.tig00000158.110	No alias	(q9at34\|rs15a_dauca : 210.0) 40S ribosomal protein S15a...	0.12	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predicted GO
MF	GO:0004784	superoxide dismutase activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005759	mitochondrial matrix	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006771	riboflavin metabolic process	IEP	Predicted GO
BP	GO:0006801	superoxide metabolic process	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
BP	GO:0009231	riboflavin biosynthetic process	IEP	Predicted GO
CC	GO:0009349	riboflavin synthase complex	IEP	Predicted GO
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0030258	lipid modification	IEP	Predicted GO
CC	GO:0031974	membrane-enclosed lumen	IEP	Predicted GO
MF	GO:0034061	DNA polymerase activity	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Predicted GO
CC	GO:0043233	organelle lumen	IEP	Predicted GO
BP	GO:0046834	lipid phosphorylation	IEP	Predicted GO
BP	GO:0046854	phosphatidylinositol phosphorylation	IEP	Predicted GO
CC	GO:0070013	intracellular organelle lumen	IEP	Predicted GO
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000630	Ribosomal_S8	7	130

External Links

No external refs found!

228163

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation