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  5. 231226

231226


Description : expansin A9


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 231226
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_24822 No alias expansin-a10 0.03 Orthogroups_2024-Update
A4A49_38718 No alias expansin-a7 0.02 Orthogroups_2024-Update
At2g28950 No alias EXPA6 [Source:UniProtKB/TrEMBL;Acc:A0A178VZL6] 0.02 Orthogroups_2024-Update
At2g40610 No alias EXPA8 [Source:UniProtKB/TrEMBL;Acc:A0A178VTJ9] 0.02 Orthogroups_2024-Update
At5g39260 No alias Expansin-A21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL81] 0.02 Orthogroups_2024-Update
Bradi2g10320 No alias expansin A14 0.02 Orthogroups_2024-Update
Brara.B03141.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Cre08.g381600 No alias expansin A24 0.03 Orthogroups_2024-Update
GRMZM2G339122 No alias expansin A1 0.02 Orthogroups_2024-Update
Glyma.12G150900 No alias expansin 12 0.02 Orthogroups_2024-Update
LOC_Os01g60770 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g16800 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g06020 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g21820 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g49410 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10020g0010 No alias (at1g26770 : 369.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
Mp1g22700.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00000399-RA No alias (q7xud0|exp10_orysa : 316.0) Expansin-A10 precursor... 0.03 Orthogroups_2024-Update
PSME_00011357-RA No alias (at2g40610 : 390.0) member of Alpha-Expansin Gene... 0.05 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.001G240900 No alias expansin A4 0.03 Orthogroups_2024-Update
Potri.013G154700 No alias expansin A8 0.04 Orthogroups_2024-Update
Potri.017G140000 No alias expansin A13 0.03 Orthogroups_2024-Update
Pp1s11_29V6 No alias expansin 2 0.02 Orthogroups_2024-Update
Pp1s33_259V6 No alias alpha expansin xpa5 0.03 Orthogroups_2024-Update
Seita.5G044100.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Seita.7G029300.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.003G444400.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Solyc04g081870 No alias Expansin A11 0.02 Orthogroups_2024-Update
Sopen08g003710 No alias Rare lipoprotein A (RlpA)-like double-psi beta-barrel 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 136 213
IPR009009 RlpA-like_DPBB 45 123
No external refs found!