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  5. 232989

232989


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_42_0000344 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000344_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 232989
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_18930 No alias polyadenylate-binding protein rbp47 0.02 Orthogroups_2024-Update
A4A49_40758 No alias polyadenylate-binding protein rbp47 0.01 Orthogroups_2024-Update
Brara.H00280.1 No alias regulatory factor *(RBP45/47) of mRNA stress granule formation 0.02 Orthogroups_2024-Update
Potri.004G017200 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
Seita.6G037200.1 No alias regulatory factor *(RBP45/47) of mRNA stress granule formation 0.01 Orthogroups_2024-Update
Sobic.001G487100.1 No alias regulatory factor *(RBP45/47) of mRNA stress granule formation 0.06 Orthogroups_2024-Update
Sopen02g025110 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 30 97
IPR000504 RRM_dom 123 192
IPR000504 RRM_dom 268 332
No external refs found!