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  5. 270468

270468


Description : polyubiquitin 10


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 270468
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
At5g37640 No alias Polyubiquitin 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHQ6] 0.03 Orthogroups_2024-Update
Potri.007G067500 No alias related to ubiquitin 1 0.02 Orthogroups_2024-Update
Pp1s227_93V6 No alias C17L7.240; polyubiquitin (UBQ10) (SEN3) [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.4G253400.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Solyc06g053210 No alias Ubiquitin (AHRD V3.3 *** J7G5B5_ROSRU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 383 454
IPR000626 Ubiquitin_dom 459 530
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 307 378
IPR000626 Ubiquitin_dom 3 74
No external refs found!