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  5. 270723

270723


Description : chloroplast signal recognition particle component (CAO)


Gene families : OG_42_0008440 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 270723
Cluster HCCA clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Solyc02g087400 No alias Ankyrin repeat-containing protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen02g032150 No alias Ankyrin repeats (3 copies) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR023780 Chromo_domain 74 114
IPR023780 Chromo_domain 260 304
IPR023780 Chromo_domain 311 354
IPR020683 Ankyrin_rpt-contain_dom 131 213
No external refs found!