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  5. 402335

402335


Description : AtL5


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 402335
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
At3g03550 No alias Uncharacterized protein At3g03550... 0.03 Orthogroups_2024-Update
Bradi2g26403 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g45890 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g51600 No alias TOXICOS EN LEVADURA 2 0.02 Orthogroups_2024-Update
Brara.F00391.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.02 Orthogroups_2024-Update
Glyma.03G203400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G046400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G087720.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU6Hr1G067020.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os01g55110 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.019G043900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G171500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G178400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc05g055390 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061DVK5_THECC) 0.02 Orthogroups_2024-Update
Sopen06g017190 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 72 113
No external refs found!