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  5. 419575

419575


Description : expansin A16


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 419575
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_04302 No alias expansin-a10 0.04 Orthogroups_2024-Update
A4A49_12237 No alias expansin-a15 0.02 Orthogroups_2024-Update
A4A49_38718 No alias expansin-a7 0.03 Orthogroups_2024-Update
At1g26770 No alias Expansin A10 [Source:UniProtKB/TrEMBL;Acc:F4HPC1] 0.02 Orthogroups_2024-Update
At2g28950 No alias EXPA6 [Source:UniProtKB/TrEMBL;Acc:A0A178VZL6] 0.03 Orthogroups_2024-Update
At2g37640 No alias EXP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VPK3] 0.02 Orthogroups_2024-Update
Bradi5g19340 No alias expansin A13 0.03 Orthogroups_2024-Update
Brara.A03836.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.B03352.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.E00745.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.F03107.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.G01411.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
GRMZM2G088791 No alias expansin 11 0.02 Orthogroups_2024-Update
GRMZM2G339122 No alias expansin A1 0.02 Orthogroups_2024-Update
Glyma.12G150900 No alias expansin 12 0.04 Orthogroups_2024-Update
Glyma.18G181700 No alias expansin A4 0.02 Orthogroups_2024-Update
HORVU1Hr1G069830.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
LOC_Os01g14650 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g31480 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g19570 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_86877g0010 No alias (at1g69530 : 387.0) Member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
PSME_00000399-RA No alias (q7xud0|exp10_orysa : 316.0) Expansin-A10 precursor... 0.03 Orthogroups_2024-Update
PSME_00006590-RA No alias (at2g40610 : 387.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00014026-RA No alias (at1g69530 : 221.0) Member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00029310-RA No alias (at1g26770 : 386.0) Encodes an expansin. Naming... 0.03 Orthogroups_2024-Update
PSME_00039952-RA No alias (at5g05290 : 224.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
Potri.001G240900 No alias expansin A4 0.02 Orthogroups_2024-Update
Potri.002G184700 No alias expansin A17 0.04 Orthogroups_2024-Update
Potri.004G123200 No alias expansin A1 0.03 Orthogroups_2024-Update
Potri.006G086100 No alias Barwin-like endoglucanases superfamily protein 0.05 Orthogroups_2024-Update
Potri.006G108000 No alias expansin A8 0.02 Orthogroups_2024-Update
Potri.008G088300 No alias expansin A1 0.05 Orthogroups_2024-Update
Potri.013G154700 No alias expansin A8 0.05 Orthogroups_2024-Update
Potri.017G140000 No alias expansin A13 0.05 Orthogroups_2024-Update
Pp1s11_29V6 No alias expansin 2 0.04 Orthogroups_2024-Update
Pp1s191_27V6 No alias alpha expansin xpa5 0.02 Orthogroups_2024-Update
Pp1s191_40V6 No alias alpha expansin xpa5 0.05 Orthogroups_2024-Update
Pp1s246_53V6 No alias alpha-expansin 1 0.04 Orthogroups_2024-Update
Pp1s251_70V6 No alias alpha-expansin 15 0.04 Orthogroups_2024-Update
Pp1s266_66V6 No alias alpha expansin xpa5 0.03 Orthogroups_2024-Update
Pp1s325_11V6 No alias expa6 gene for putative alpha expansin protein family EXPA6 0.04 Orthogroups_2024-Update
Pp1s33_251V6 No alias expa5 gene for putative alpha expansin protein family EXPA5 0.03 Orthogroups_2024-Update
Pp1s33_258V6 No alias alpha expansin xpa5 0.03 Orthogroups_2024-Update
Pp1s34_1V6 No alias alpha-expansin 8 0.02 Orthogroups_2024-Update
Seita.6G251700.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.003G128800.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.003G338801.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.003G444400.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.009G173700.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Solyc07g063210 No alias Expansin (AHRD V3.3 *** G4XZZ0_9GENT) 0.02 Orthogroups_2024-Update
Solyc09g018020 No alias Expansin (AHRD V3.3 *** G4XZW3_9GENT) 0.03 Orthogroups_2024-Update
Sopen05g003690 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
CC GO:1902495 transmembrane transporter complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
CC GO:1990351 transporter complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 64 146
IPR007117 Expansin_CBD 158 234
No external refs found!