419963


Description : NAD(P)-binding Rossmann-fold superfamily protein


Gene families : OG_42_0000221 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 419963
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
173170 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G458659 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G108400 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Seita.7G179100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Seita.7G179200.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Sopen01g043070 No alias short chain dehydrogenase 0.02 Orthogroups_2024-Update
Sopen03g013380 No alias short chain dehydrogenase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003796 lysozyme activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
BP GO:0006027 glycosaminoglycan catabolic process IEP Predicted GO
BP GO:0009253 peptidoglycan catabolic process IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0030203 glycosaminoglycan metabolic process IEP Predicted GO
MF GO:0030674 protein binding, bridging IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0051015 actin filament binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0060090 molecular adaptor activity IEP Predicted GO
MF GO:0061783 peptidoglycan muralytic activity IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR002347 SDR_fam 12 159
No external refs found!