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  5. 432504

432504


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG_42_0001418 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001418_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 432504
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
126729 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os03g19650 No alias PPR2, putative, expressed 0.02 Orthogroups_2024-Update
Potri.008G098700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Solyc08g045780 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 45
IPR002885 Pentatricopeptide_repeat 48 95
No external refs found!