437944


Description : auxin response factor 2


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 437944
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
A4A49_18150 No alias auxin response factor 8 0.06 Orthogroups_2024-Update
Bradi1g33160 No alias auxin response factor 16 0.02 Orthogroups_2024-Update
HORVU2Hr1G121110.32 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
PSME_00020341-RA No alias (at1g19220 : 630.0) Encodes an auxin response factor... 0.02 Orthogroups_2024-Update
Pp1s133_56V6 No alias auxin response factor 8 0.02 Orthogroups_2024-Update
Pp1s64_138V6 No alias arf1-binding protein 0.02 Orthogroups_2024-Update
Sobic.001G217300.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G229000.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
BP GO:0009725 response to hormone IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 663 751
IPR003340 B3_DNA-bd 139 240
IPR010525 Auxin_resp 266 348
No external refs found!