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Description : Nucleic acid-binding, OB-fold-like protein
Gene families : OG_42_0008388 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008388_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Selaginella: 438805 | |
| Cluster | HCCA clusters: Cluster_93 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At3g48500 | No alias | Nucleic acid-binding, OB-fold-like protein... | 0.04 | Orthogroups_2024-Update | |
| Bradi2g57887 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.07 | Orthogroups_2024-Update | |
| Cre07.g348500 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G091419 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.04G193700 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.04 | Orthogroups_2024-Update | |
| Kfl00306_0020 | kfl00306_0020_v1.1 | (at3g48500 : 155.0) PIGMENT DEFECTIVE 312 (PDE312);... | 0.02 | Orthogroups_2024-Update | |
| Seita.5G417800.1 | No alias | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10) | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G392000.1 | No alias | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10) | 0.02 | Orthogroups_2024-Update | |
| Solyc03g111050 | No alias | CONSTANS interacting protein 5 | 0.06 | Orthogroups_2024-Update | |
| Sopen03g030220 | No alias | hypothetical protein | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001671 | ATPase activator activity | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
| MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
| MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Predicted GO |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
| MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| CC | GO:0005622 | intracellular | IEP | Predicted GO |
| CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
| CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0006177 | GMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006553 | lysine metabolic process | IEP | Predicted GO |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Predicted GO |
| BP | GO:0006996 | organelle organization | IEP | Predicted GO |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
| MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
| MF | GO:0008837 | diaminopimelate epimerase activity | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009085 | lysine biosynthetic process | IEP | Predicted GO |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Predicted GO |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0009163 | nucleoside biosynthetic process | IEP | Predicted GO |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
| BP | GO:0010038 | response to metal ion | IEP | Predicted GO |
| BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
| MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Predicted GO |
| MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Predicted GO |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
| MF | GO:0019238 | cyclohydrolase activity | IEP | Predicted GO |
| BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
| BP | GO:0022406 | membrane docking | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Predicted GO |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | Predicted GO |
| BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Predicted GO |
| BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
| BP | GO:0046037 | GMP metabolic process | IEP | Predicted GO |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | Predicted GO |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | Predicted GO |
| MF | GO:0047661 | amino-acid racemase activity | IEP | Predicted GO |
| BP | GO:0048278 | vesicle docking | IEP | Predicted GO |
| MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
| BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
| BP | GO:0051640 | organelle localization | IEP | Predicted GO |
| MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
| BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| BP | GO:0140029 | exocytic process | IEP | Predicted GO |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Predicted GO |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
| BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:1901070 | guanosine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |