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  4. Sequence
  5. 441722

441722


Description : pleiotropic drug resistance 12


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 441722
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
A4A49_20840 No alias abc transporter g family member 36 0.02 Orthogroups_2024-Update
A4A49_38659 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
Bradi2g43150 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Brara.D02216.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Brara.G01592.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Cre16.g655450 No alias pleiotropic drug resistance 3 0.03 Orthogroups_2024-Update
Glyma.03G168000 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.10G203000 No alias pleiotropic drug resistance 11 0.07 Orthogroups_2024-Update
HORVU3Hr1G053380.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
HORVU5Hr1G049450.2 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
LOC_Os01g42380 No alias pleiotropic drug resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g37700 No alias pleiotropic drug resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g32820 No alias pleiotropic drug resistance protein 3, putative, expressed 0.03 Orthogroups_2024-Update
MA_10426978g0010 No alias (at3g16340 : 369.0) pleiotropic drug resistance 1... 0.04 Orthogroups_2024-Update
MA_10427561g0010 No alias (q8gu88|pdr7_orysa : 1276.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
MA_249533g0010 No alias (at2g29940 : 311.0) pleiotropic drug resistance 3... 0.03 Orthogroups_2024-Update
MA_42871g0010 No alias (at1g59870 : 335.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
PSME_00001268-RA No alias (at1g59870 : 1834.0) ATP binding cassette transporter.... 0.02 Orthogroups_2024-Update
PSME_00001761-RA No alias (q5z9s8|pdr12_orysa : 1822.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00002220-RA No alias (q5z9s8|pdr12_orysa : 1203.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00041754-RA No alias (q949g3|pdr1_nicpl : 474.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Potri.010G153700 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Potri.015G006000 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Pp1s15_135V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Pp1s59_42V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Pp1s72_290V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.5G221300.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.9G283100.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G216232.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G216300.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Sobic.004G254100.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.008G033700.2 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc12g100180 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g100190 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen05g015600 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
Sopen05g032110 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen09g034570 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen11g026710 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen12g034810 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 844 996
IPR013525 ABC_2_trans 466 678
IPR013525 ABC_2_trans 1142 1354
IPR013581 PDR_assoc 683 755
IPR003959 ATPase_AAA_core 1611 1666
IPR029481 ABC_trans_N 92 142
No external refs found!