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  4. Sequence
  5. 55945

55945


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0165758 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 55945
Cluster HCCA clusters: Cluster_143


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 50
IPR002885 Pentatricopeptide_repeat 53 83
IPR002885 Pentatricopeptide_repeat 208 236
IPR002885 Pentatricopeptide_repeat 271 299
IPR002885 Pentatricopeptide_repeat 84 109
IPR002885 Pentatricopeptide_repeat 116 142
IPR002885 Pentatricopeptide_repeat 239 267
IPR002885 Pentatricopeptide_repeat 146 176
IPR002885 Pentatricopeptide_repeat 177 206
No external refs found!