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  5. 58936

58936


Description : Lateral organ boundaries (LOB) domain family protein


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 58936
Cluster HCCA clusters: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
At2g30130 No alias PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1] 0.02 Orthogroups_2024-Update
At3g26620 No alias LOB domain-containing protein 23... 0.02 Orthogroups_2024-Update
Bradi3g35280 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Glyma.11G152333 No alias LOB domain-containing protein 1 0.04 Orthogroups_2024-Update
Glyma.13G328500 No alias LOB domain-containing protein 11 0.02 Orthogroups_2024-Update
LOC_Os01g39150 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_290245g0010 No alias (at1g65620 : 200.0) Required for formation of a... 0.09 Orthogroups_2024-Update
MA_61242g0010 No alias (at5g63090 : 153.0) Involved in lateral organ... 0.03 Orthogroups_2024-Update
Mp5g10960.1 No alias transcription factor (AS2/LOB) 0.04 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
PSME_00049184-RA No alias (at1g07900 : 103.0) LOB domain-containing protein 1... 0.05 Orthogroups_2024-Update
PSME_00056008-RA No alias (at2g30130 : 185.0) Overexpression/activation tagged... 0.02 Orthogroups_2024-Update
Potri.008G072800 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Pp1s56_77V6 No alias ramosa 2 0.01 Orthogroups_2024-Update
Seita.9G149300.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Solyc11g045530 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen12g034780 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 7 104
No external refs found!