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  5. 60006

60006


Description : WD-40 repeat family protein / beige-related


Gene families : OG_42_0003539 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 60006
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
At2g45540 No alias BEACH domain-containing protein C2... 0.02 Orthogroups_2024-Update
Glyma.09G267100 No alias WD-40 repeat family protein / beige-related 0.05 Orthogroups_2024-Update
Glyma.18G223300 No alias WD-40 repeat family protein / beige-related 0.05 Orthogroups_2024-Update
Kfl00227_0060 kfl00227_0060_v1.1 (at2g45540 : 892.0) WD-40 repeat family protein /... 0.02 Orthogroups_2024-Update
MA_16421g0010 No alias (at2g45540 : 735.0) WD-40 repeat family protein /... 0.03 Orthogroups_2024-Update
PSME_00002966-RA No alias (at2g45540 : 1896.0) WD-40 repeat family protein /... 0.02 Orthogroups_2024-Update
Potri.014G072600 No alias WD-40 repeat family protein / beige-related 0.02 Orthogroups_2024-Update
Pp1s88_98V6 No alias beach domain-containing protein 0.02 Orthogroups_2024-Update
Sobic.006G173200.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 2442 2471
IPR000409 BEACH_dom 2008 2284
IPR031570 DUF4704 521 800
IPR023362 PH-BEACH_dom 1890 1980
No external refs found!