Sopen01g032590

Description : NOGCT (NUC087) domain

Gene families : OG_42_0003813 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003813_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g032590
Cluster	HCCA clusters: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
At1g50920	No alias	Nucleolar GTP-binding protein 1...	0.05	Orthogroups_2024-Update
Bradi1g46650	No alias	Nucleolar GTP-binding protein	0.04	Orthogroups_2024-Update
Brara.H03030.1	No alias	regulatory GTPase (NOG1) of LSU processome	0.03	Orthogroups_2024-Update
Brara.J00284.1	No alias	regulatory GTPase (NOG1) of LSU processome	0.02	Orthogroups_2024-Update
Glyma.12G057800	No alias	Nucleolar GTP-binding protein	0.03	Orthogroups_2024-Update
Potri.001G258900	No alias	Nucleolar GTP-binding protein	0.02	Orthogroups_2024-Update
Seita.4G040700.1	No alias	regulatory GTPase (NOG1) of LSU processome	0.05	Orthogroups_2024-Update
Sobic.010G073200.1	No alias	regulatory GTPase (NOG1) of LSU processome	0.06	Orthogroups_2024-Update
Solyc07g053730	No alias	Nucleolar GTP-binding protein 1 (AHRD V3.3 *** K4CFR8_SOLLC)	0.03	Orthogroups_2024-Update
evm.model.contig_782.2	No alias	(at1g50920 : 569.0) Nucleolar GTP-binding protein;...	0.01	Orthogroups_2024-Update
evm.model.tig00021432.35	No alias	(at1g50920 : 605.0) Nucleolar GTP-binding protein;...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010674	NOG1_Rossman_fold_dom	236	292
IPR012973	NOG_C	413	466

External Links

No external refs found!