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  5. 82268

82268


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 82268
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
16621 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 478 526
IPR002885 Pentatricopeptide_repeat 379 423
IPR002885 Pentatricopeptide_repeat 274 322
IPR002885 Pentatricopeptide_repeat 578 592
IPR002885 Pentatricopeptide_repeat 176 205
IPR002885 Pentatricopeptide_repeat 351 375
IPR002885 Pentatricopeptide_repeat 647 671
IPR002885 Pentatricopeptide_repeat 77 102
IPR002885 Pentatricopeptide_repeat 550 575
IPR002885 Pentatricopeptide_repeat 49 74
No external refs found!