84724

Description : polyribonucleotide nucleotidyltransferase, putative

Gene families : OG_42_0002046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002046_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Selaginella: 84724
Cluster	HCCA clusters: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g56280	No alias	polyribonucleotide nucleotidyltransferase, putative	0.06	Orthogroups_2024-Update
Bradi3g48860	No alias	polyribonucleotide nucleotidyltransferase, putative	0.05	Orthogroups_2024-Update
Brara.C00633.1	No alias	phosphorolytic exoribonuclease *(PNP) & EC_2.7...	0.02	Orthogroups_2024-Update
Brara.J02010.1	No alias	phosphorolytic exoribonuclease *(PNP) & EC_2.7...	0.05	Orthogroups_2024-Update
HORVU6Hr1G057570.8	No alias	phosphorolytic exoribonuclease *(PNP) & EC_2.7...	0.02	Orthogroups_2024-Update
Kfl00519_0070	kfl00519_0070_v1.1	(at5g14580 : 753.0) polyribonucleotide...	0.02	Orthogroups_2024-Update
LOC_Os02g40460	No alias	S1 RNA binding domain containing protein, expressed	0.04	Orthogroups_2024-Update
Seita.1G235700.1	No alias	phosphorolytic exoribonuclease *(PNP) & EC_2.7...	0.03	Orthogroups_2024-Update
Seita.2G044800.1	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	Orthogroups_2024-Update
Sobic.002G045700.1	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	Orthogroups_2024-Update
Sobic.004G215900.1	No alias	phosphorolytic exoribonuclease *(PNP) & EC_2.7...	0.05	Orthogroups_2024-Update
Solyc02g086600	No alias	polyribonucleotide nucleotidyltransferase (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
evm.model.tig00021073.40	No alias	(at5g14580 : 307.0) polyribonucleotide...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	InterProScan predictions
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity	IEP	Predicted GO
MF	GO:0003937	IMP cyclohydrolase activity	IEP	Predicted GO
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	Predicted GO
MF	GO:0004518	nuclease activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005643	nuclear pore	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Predicted GO
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
MF	GO:0017056	structural constituent of nuclear pore	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
MF	GO:0019238	cyclohydrolase activity	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
MF	GO:0061505	DNA topoisomerase II activity	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003029	S1_domain	631	688
IPR004088	KH_dom_type_1	567	622
IPR015847	ExoRNase_PH_dom2	146	209
IPR015848	PNPase_PH_RNA-bd_bac/org-type	241	321
IPR001247	ExoRNase_PH_dom1	15	143
IPR001247	ExoRNase_PH_dom1	325	458

External Links

No external refs found!

84724

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation