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  4. Sequence
  5. 85007

85007


Description : maternal effect embryo arrest 59


Gene families : OG_42_0004637 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 85007
Cluster HCCA clusters: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
A4A49_05891 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi1g67120 No alias maternal effect embryo arrest 59 0.03 Orthogroups_2024-Update
Glyma.08G334500 No alias maternal effect embryo arrest 59 0.05 Orthogroups_2024-Update
Glyma.18G067500 No alias maternal effect embryo arrest 59 0.03 Orthogroups_2024-Update
LOC_Os03g15920 No alias expressed protein 0.02 Orthogroups_2024-Update
Pp1s114_70V6 No alias at4g37300 c7a10_60 0.02 Orthogroups_2024-Update
Sobic.001G426400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc06g006000 No alias Maternal effect embryo arrest 59 (AHRD V3.3 *** A0A061GXA8_THECC) 0.02 Orthogroups_2024-Update
Sopen06g001980 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!