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Description : RING/U-box superfamily protein
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Selaginella: 8844 | |
| Cluster | HCCA clusters: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_18116 | No alias | ring-h2 finger protein atl78 | 0.02 | Orthogroups_2024-Update | |
| A4A49_39617 | No alias | ring-h2 finger protein atl1 | 0.03 | Orthogroups_2024-Update | |
| Brara.A00708.1 | No alias | regulatory E3 ubiquitin ligase targeted to IRT1 *(IDF1) | 0.03 | Orthogroups_2024-Update | |
| Brara.A03446.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.E01886.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.G02364.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.G03107.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G146847 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G150832 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G042300 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU4Hr1G004390.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g33720 | No alias | RING-H2 finger protein, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| LOC_Os02g43120 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os12g42530 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update | |
| MA_94359g0010 | No alias | (at4g35480 : 121.0) Encodes a putative RING-H2 finger... | 0.02 | Orthogroups_2024-Update | |
| Potri.001G400600 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Sobic.007G165000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G110200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc01g088440 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g112340 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT3G05200.1) | 0.03 | Orthogroups_2024-Update | |
| Solyc11g066510 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Predicted GO |
| MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
| MF | GO:0033218 | amide binding | IEP | Predicted GO |
| BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Predicted GO |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
| BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
| MF | GO:1901567 | fatty acid derivative binding | IEP | Predicted GO |
| MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 2 | 45 |
| No external refs found! |