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  4. Sequence
  5. 90314

90314


Description : serine hydroxymethyltransferase 6


Gene families : OG_42_0000626 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Selaginella: 90314
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Bradi2g56557 No alias serine hydroxymethyltransferase 7 0.02 Orthogroups_2024-Update
Brara.A00108.1 No alias serine hydroxymethyltransferase *(SHM) & serine... 0.02 Orthogroups_2024-Update
Brara.H00601.1 No alias serine hydroxymethyltransferase *(SHM) & serine... 0.05 Orthogroups_2024-Update
Glyma.14G184500 No alias serine hydroxymethyltransferase 2 0.02 Orthogroups_2024-Update
Potri.002G090200 No alias serine hydroxymethyltransferase 7 0.03 Orthogroups_2024-Update
Potri.005G170800 No alias serine hydroxymethyltransferase 7 0.03 Orthogroups_2024-Update
Sobic.003G373600.1 No alias serine hydroxymethyltransferase *(SHM) & serine... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 44 443
No external refs found!