1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen01g041360

Sopen01g041360


Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family


Gene families : OG_42_0001648 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001648_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g041360
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
270545 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.11 Orthogroups_2024-Update
A4A49_61918 No alias 60s ribosomal protein l7a-2 0.08 Orthogroups_2024-Update
At2g47610 No alias 60S ribosomal protein L7a-1... 0.08 Orthogroups_2024-Update
Bradi4g34750 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.19 Orthogroups_2024-Update
Bradi5g24680 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.21 Orthogroups_2024-Update
Brara.A01492.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.C02368.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.D00049.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.29 Orthogroups_2024-Update
Brara.E00034.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Brara.G01985.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.29 Orthogroups_2024-Update
Brara.I04344.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.25 Orthogroups_2024-Update
Brara.K01473.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Cre12.g529651 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.16 Orthogroups_2024-Update
GRMZM2G178968 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.1 Orthogroups_2024-Update
GRMZM5G870752 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.09 Orthogroups_2024-Update
Glyma.02G002800 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.19 Orthogroups_2024-Update
Glyma.10G006200 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.15 Orthogroups_2024-Update
Glyma.11G103700 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.18 Orthogroups_2024-Update
Glyma.12G028500 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.06 Orthogroups_2024-Update
HORVU5Hr1G076700.2 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.16 Orthogroups_2024-Update
HORVU7Hr1G054670.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Kfl00122_0060 kfl00122_0060_v1.1 (p35685|rl7a_orysa : 414.0) 60S ribosomal protein L7a -... 0.07 Orthogroups_2024-Update
MA_109678g0010 No alias (p35685|rl7a_orysa : 335.0) 60S ribosomal protein L7a -... 0.11 Orthogroups_2024-Update
Mp2g23250.1 No alias component RPL7a of LSU proteome component 0.1 Orthogroups_2024-Update
Mp8g17650.1 No alias component RPL7a of LSU proteome component 0.09 Orthogroups_2024-Update
PSME_00011086-RA No alias (p35685|rl7a_orysa : 336.0) 60S ribosomal protein L7a -... 0.06 Orthogroups_2024-Update
Potri.004G113800 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 Orthogroups_2024-Update
Pp1s149_30V6 No alias 60s ribosomal protein l7a 0.07 Orthogroups_2024-Update
Pp1s149_35V6 No alias 60s ribosomal protein l7a 0.12 Orthogroups_2024-Update
Pp1s211_31V6 No alias 60s ribosomal protein l7a 0.21 Orthogroups_2024-Update
Pp1s37_339V6 No alias 60s ribosomal protein l7a 0.03 Orthogroups_2024-Update
Pp1s90_23V6 No alias 60s ribosomal protein l7a 0.03 Orthogroups_2024-Update
Seita.2G267400.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.2 Orthogroups_2024-Update
Seita.4G177300.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Seita.6G224900.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.21 Orthogroups_2024-Update
Sobic.002G258800.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.26 Orthogroups_2024-Update
Sobic.002G259000.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Solyc01g097760 No alias 60S ribosomal protein L7A-like protein (AHRD V3.3 ***... 0.28 Orthogroups_2024-Update
Solyc06g050120 No alias 60S ribosomal protein L7A-like (AHRD V3.3 *** Q2VCI3_SOLTU) 0.07 Orthogroups_2024-Update
Solyc06g064470 No alias 60S ribosomal protein L7A-like protein (AHRD V3.3 ***... 0.31 Orthogroups_2024-Update
evm.model.contig_3485.8 No alias (p35685|rl7a_orysa : 308.0) 60S ribosomal protein L7a -... 0.32 Orthogroups_2024-Update
evm.model.tig00000128.22 No alias (p35685|rl7a_orysa : 240.0) 60S ribosomal protein L7a -... 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 115 206
No external refs found!