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  5. Sopen01g043180

Sopen01g043180


Description : Plectin/S10 domain


Gene families : OG_42_0001576 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001576_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g043180
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
37555 No alias RNA binding Plectin/S10 domain-containing protein 0.2 Orthogroups_2024-Update
A4A49_36949 No alias 40s ribosomal protein s10-3 0.2 Orthogroups_2024-Update
A4A49_64300 No alias 40s ribosomal protein s10-3 0.24 Orthogroups_2024-Update
At5g52650 No alias 40S ribosomal protein S10-3... 0.06 Orthogroups_2024-Update
Bradi2g61560 No alias RNA binding Plectin/S10 domain-containing protein 0.21 Orthogroups_2024-Update
Bradi3g43060 No alias RNA binding Plectin/S10 domain-containing protein 0.25 Orthogroups_2024-Update
Brara.A01568.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.35 Orthogroups_2024-Update
Brara.C01425.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.31 Orthogroups_2024-Update
Brara.D01152.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.25 Orthogroups_2024-Update
Brara.G01517.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Brara.H01564.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.J00789.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.K00178.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Cre09.g411100 No alias RNA binding Plectin/S10 domain-containing protein 0.2 Orthogroups_2024-Update
GRMZM2G171484 No alias RNA binding Plectin/S10 domain-containing protein 0.17 Orthogroups_2024-Update
Glyma.01G222100 No alias RNA binding Plectin/S10 domain-containing protein 0.3 Orthogroups_2024-Update
Glyma.05G211100 No alias RNA binding Plectin/S10 domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.08G017500 No alias RNA binding Plectin/S10 domain-containing protein 0.05 Orthogroups_2024-Update
Glyma.11G021700 No alias RNA binding Plectin/S10 domain-containing protein 0.14 Orthogroups_2024-Update
HORVU0Hr1G004700.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
HORVU3Hr1G111760.2 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.28 Orthogroups_2024-Update
Kfl01159_0030 kfl01159_0030_v1.1 (q9ayp4|rs10_orysa : 213.0) 40S ribosomal protein S10 -... 0.03 Orthogroups_2024-Update
LOC_Os04g35090 No alias 40S ribosomal protein S10, putative, expressed 0.08 Orthogroups_2024-Update
MA_111018g0010 No alias (q9ayp4|rs10_orysa : 184.0) 40S ribosomal protein S10 -... 0.06 Orthogroups_2024-Update
MA_314020g0010 No alias (q9ayp4|rs10_orysa : 182.0) 40S ribosomal protein S10 -... 0.1 Orthogroups_2024-Update
Mp2g00580.1 No alias component RPS10 of SSU proteome 0.07 Orthogroups_2024-Update
PSME_00025508-RA No alias (q9ayp4|rs10_orysa : 181.0) 40S ribosomal protein S10 -... 0.12 Orthogroups_2024-Update
PSME_00031081-RA No alias (q9ayp4|rs10_orysa : 170.0) 40S ribosomal protein S10 -... 0.07 Orthogroups_2024-Update
Potri.004G073500 No alias RNA binding Plectin/S10 domain-containing protein 0.15 Orthogroups_2024-Update
Potri.013G027900 No alias RNA binding Plectin/S10 domain-containing protein 0.16 Orthogroups_2024-Update
Pp1s18_236V6 No alias 40s ribosomal protein s10 0.07 Orthogroups_2024-Update
Pp1s255_28V6 No alias 40s ribosomal protein s10 0.14 Orthogroups_2024-Update
Pp1s281_7V6 No alias 40s ribosomal protein s10 0.28 Orthogroups_2024-Update
Pp1s427_37V6 No alias 40s ribosomal protein s10 0.28 Orthogroups_2024-Update
Pp1s43_46V6 No alias 40s ribosomal protein s10 0.37 Orthogroups_2024-Update
Pp1s95_87V6 No alias 40s ribosomal protein s10 0.02 Orthogroups_2024-Update
Seita.5G462400.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Seita.7G099000.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.24 Orthogroups_2024-Update
Sobic.003G436700.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.24 Orthogroups_2024-Update
Sobic.006G081100.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.36 Orthogroups_2024-Update
Solyc01g099670 No alias meloidogyne-induced giant cell protein db212 0.28 Orthogroups_2024-Update
Solyc12g096540 No alias 40S ribosomal protein S10-like (AHRD V3.3 *** Q2XPV4_SOLTU) 0.03 Orthogroups_2024-Update
evm.model.contig_636.5 No alias (q9ayp4|rs10_orysa : 95.9) 40S ribosomal protein S10 -... 0.48 Orthogroups_2024-Update
evm.model.tig00001164.5 No alias (original description: no original description) 0.23 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005326 S10_plectin_N 3 94
No external refs found!