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  5. Sopen01g043420

Sopen01g043420


Description : Ribosomal protein L18e/L15


Gene families : OG_42_0002023 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g043420
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
267976 No alias ribosomal protein L18 0.17 Orthogroups_2024-Update
A4A49_59911 No alias 60s ribosomal protein l18-2 0.11 Orthogroups_2024-Update
A4A49_64192 No alias 60s ribosomal protein l18-2 0.14 Orthogroups_2024-Update
At3g05590 No alias RPL18 [Source:UniProtKB/TrEMBL;Acc:A0A178V8M9] 0.12 Orthogroups_2024-Update
At5g27850 No alias 60S ribosomal protein L18-3... 0.06 Orthogroups_2024-Update
Bradi1g17970 No alias Ribosomal protein L18e/L15 superfamily protein 0.13 Orthogroups_2024-Update
Bradi1g62930 No alias ribosomal protein L18 0.15 Orthogroups_2024-Update
Bradi2g35090 No alias Ribosomal protein L18e/L15 superfamily protein 0.3 Orthogroups_2024-Update
Brara.A03704.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.34 Orthogroups_2024-Update
Brara.B03559.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Brara.C03111.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.42 Orthogroups_2024-Update
Brara.F02840.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.41 Orthogroups_2024-Update
Brara.I00454.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.22 Orthogroups_2024-Update
Cre12.g512600 No alias ribosomal protein L18 0.36 Orthogroups_2024-Update
GRMZM2G104025 No alias Ribosomal protein L18e/L15 superfamily protein 0.09 Orthogroups_2024-Update
GRMZM5G803952 No alias Ribosomal protein L18e/L15 superfamily protein 0.1 Orthogroups_2024-Update
Glyma.03G215300 No alias Ribosomal protein L18e/L15 superfamily protein 0.12 Orthogroups_2024-Update
Glyma.03G234600 No alias ribosomal protein L18 0.07 Orthogroups_2024-Update
Glyma.10G150800 No alias ribosomal protein L18 0.17 Orthogroups_2024-Update
Glyma.19G211800 No alias Ribosomal protein L18e/L15 superfamily protein 0.1 Orthogroups_2024-Update
Glyma.19G232100 No alias ribosomal protein L18 0.08 Orthogroups_2024-Update
Glyma.20G237400 No alias ribosomal protein L18 0.2 Orthogroups_2024-Update
HORVU1Hr1G022570.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.16 Orthogroups_2024-Update
HORVU2Hr1G018820.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.16 Orthogroups_2024-Update
Kfl00174_0110 kfl00174_0110_v1.1 (at3g05590 : 286.0) Encodes cytoplasmic ribosomal... 0.06 Orthogroups_2024-Update
LOC_Os03g22180 No alias 60S ribosomal protein L18-3, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g06310 No alias 60S ribosomal protein L18-3, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g47780 No alias 60S ribosomal protein L18-3, putative, expressed 0.03 Orthogroups_2024-Update
Mp1g22500.1 No alias component RPL18 of LSU proteome component 0.17 Orthogroups_2024-Update
PSME_00010533-RA No alias (at5g27850 : 302.0) Ribosomal protein L18e/L15... 0.14 Orthogroups_2024-Update
Potri.002G202800 No alias ribosomal protein L18 0.06 Orthogroups_2024-Update
Potri.005G023500 No alias ribosomal protein L18 0.08 Orthogroups_2024-Update
Potri.014G127300 No alias ribosomal protein L18 0.18 Orthogroups_2024-Update
Pp1s2_233V6 No alias 60s ribosomal protein l18 0.08 Orthogroups_2024-Update
Pp1s304_9V6 No alias 60s ribosomal protein l18 0.34 Orthogroups_2024-Update
Pp1s45_11V6 No alias 60s ribosomal protein l18 0.16 Orthogroups_2024-Update
Pp1s45_191V6 No alias 60s ribosomal protein l18 0.02 Orthogroups_2024-Update
Pp1s536_8V6 No alias 60s ribosomal protein l18 0.15 Orthogroups_2024-Update
Seita.2G430300.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Seita.7G267500.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.17 Orthogroups_2024-Update
Seita.9G410200.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.26 Orthogroups_2024-Update
Sobic.001G377800.2 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.21 Orthogroups_2024-Update
Sobic.002G415500.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Sobic.009G050300.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.21 Orthogroups_2024-Update
Solyc01g099900 No alias 60S ribosomal protein L18, putative (AHRD V3.3 *** B9RFD6_RICCO) 0.28 Orthogroups_2024-Update
Solyc09g075290 No alias 60S ribosomal protein L18, putative (AHRD V3.3 *** B9SAT7_RICCO) 0.25 Orthogroups_2024-Update
evm.model.contig_3399.2 No alias (at3g05590 : 193.0) Encodes cytoplasmic ribosomal... 0.54 Orthogroups_2024-Update
evm.model.tig00000142.18 No alias (o65729|rl18_cicar : 134.0) 60S ribosomal protein L18... 0.23 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 2 186
No external refs found!