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Description : 60s Acidic ribosomal protein
Gene families : OG_42_0002306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002306_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen01g046810 | |
| Cluster | HCCA clusters: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 133023 | No alias | 60S acidic ribosomal protein family | 0.3 | Orthogroups_2024-Update | |
| At1g01100 | No alias | 60S acidic ribosomal protein P1-1... | 0.05 | Orthogroups_2024-Update | |
| At4g00810 | No alias | AT4G00810 protein [Source:UniProtKB/TrEMBL;Acc:B9DFS7] | 0.02 | Orthogroups_2024-Update | |
| Bradi3g13750 | No alias | 60S acidic ribosomal protein family | 0.08 | Orthogroups_2024-Update | |
| Brara.C02860.1 | No alias | component *(RPP1) of large ribosomal-subunit (LSU) proteome | 0.35 | Orthogroups_2024-Update | |
| Brara.I00080.1 | No alias | component *(RPP1) of large ribosomal-subunit (LSU) proteome | 0.34 | Orthogroups_2024-Update | |
| Brara.I05590.1 | No alias | component *(RPP1) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
| Brara.J00070.1 | No alias | component *(RPP1) of large ribosomal-subunit (LSU) proteome | 0.25 | Orthogroups_2024-Update | |
| Cre17.g738300 | No alias | 60S acidic ribosomal protein family | 0.38 | Orthogroups_2024-Update | |
| Glyma.03G260900 | No alias | 60S acidic ribosomal protein family | 0.14 | Orthogroups_2024-Update | |
| Glyma.04G229000 | No alias | 60S acidic ribosomal protein family | 0.1 | Orthogroups_2024-Update | |
| Glyma.06G135800 | No alias | 60S acidic ribosomal protein family | 0.2 | Orthogroups_2024-Update | |
| Glyma.19G259800 | No alias | 60S acidic ribosomal protein family | 0.19 | Orthogroups_2024-Update | |
| HORVU7Hr1G075360.2 | No alias | component *(RPP1) of large ribosomal-subunit (LSU) proteome | 0.24 | Orthogroups_2024-Update | |
| Kfl01021_0050 | kfl01021_0050_v1.1 | (p29763|rla1_chlre : 92.0) 60S acidic ribosomal protein... | 0.03 | Orthogroups_2024-Update | |
| LOC_Os08g02340 | No alias | 60S acidic ribosomal protein, putative, expressed | 0.05 | Orthogroups_2024-Update | |
| MA_10430200g0010 | No alias | (at5g24510 : 103.0) 60S acidic ribosomal protein family;... | 0.03 | Orthogroups_2024-Update | |
| Mp6g11950.1 | No alias | component RPP1 of LSU proteome component | 0.19 | Orthogroups_2024-Update | |
| PSME_00011424-RA | No alias | (at5g24510 : 97.1) 60S acidic ribosomal protein family;... | 0.08 | Orthogroups_2024-Update | |
| Potri.012G021700 | No alias | 60S acidic ribosomal protein family | 0.08 | Orthogroups_2024-Update | |
| Potri.014G105400 | No alias | 60S acidic ribosomal protein family | 0.16 | Orthogroups_2024-Update | |
| Potri.015G004700 | No alias | 60S acidic ribosomal protein family | 0.17 | Orthogroups_2024-Update | |
| Pp1s134_153V6 | No alias | 60s acidic ribosomal protein | 0.09 | Orthogroups_2024-Update | |
| Pp1s152_152V6 | No alias | 60s acidic ribosomal protein | 0.43 | Orthogroups_2024-Update | |
| Pp1s28_131V6 | No alias | 60s acidic ribosomal protein | 0.29 | Orthogroups_2024-Update | |
| Pp1s49_284V6 | No alias | 60s acidic ribosomal protein | 0.07 | Orthogroups_2024-Update | |
| Pp1s68_115V6 | No alias | 60s acidic ribosomal protein p1 | 0.19 | Orthogroups_2024-Update | |
| Seita.6G085600.1 | No alias | component *(RPP1) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Sobic.007G018300.1 | No alias | component *(RPP1) of large ribosomal-subunit (LSU) proteome | 0.18 | Orthogroups_2024-Update | |
| Solyc01g104370 | No alias | 60S acidic ribosomal protein P1 (AHRD V3.3 *** A0A199VEQ5_ANACO) | 0.41 | Orthogroups_2024-Update | |
| Sopen01g030870 | No alias | 60s Acidic ribosomal protein | 0.05 | Orthogroups_2024-Update | |
| evm.model.contig_2051.2 | No alias | no hits & (original description: no original description) | 0.28 | Orthogroups_2024-Update | |
| evm.model.contig_4546.2 | No alias | no hits & (original description: no original description) | 0.06 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
No InterPro domains available for this sequence
| No external refs found! |