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  5. Sopen01g047920

Sopen01g047920


Description : ABC-2 type transporter


Gene families : OG_42_0000390 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g047920
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
A4A49_13149 No alias abc transporter g family member 15 0.02 Orthogroups_2024-Update
A4A49_28158 No alias abc transporter g family member 11 0.02 Orthogroups_2024-Update
GRMZM2G096952 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
GRMZM2G308860 No alias white-brown complex homolog protein 11 0.02 Orthogroups_2024-Update
GRMZM5G870629 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
Glyma.03G135200 No alias ABC-2 type transporter family protein 0.02 Orthogroups_2024-Update
Glyma.08G070800 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
Glyma.08G071100 No alias white-brown complex homolog protein 11 0.04 Orthogroups_2024-Update
Glyma.09G160000 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
Glyma.13G043500 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
Glyma.16G209400 No alias white-brown complex homolog protein 11 0.04 Orthogroups_2024-Update
HORVU1Hr1G030200.1 No alias wax lipid exporter *(CER5) & subfamily ABCG transporter 0.02 Orthogroups_2024-Update
HORVU2Hr1G018920.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G027440.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00574_0100 kfl00574_0100_v1.1 (at1g17840 : 520.0) Encodes a plasma membrane-localized... 0.02 Orthogroups_2024-Update
MA_10436774g0010 No alias (at1g17840 : 879.0) Encodes a plasma membrane-localized... 0.02 Orthogroups_2024-Update
Mp4g01480.1 No alias subfamily ABCG transporter 0.01 Orthogroups_2024-Update
Potri.001G311300 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
Potri.001G312200 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
Potri.009G051200 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Potri.017G155300 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
Seita.3G079600.1 No alias wax lipid exporter *(CER5) & subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.7G176000.1 No alias suberin/cutin lipid exporter *(DSO) & subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Sobic.005G225800.2 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.006G155700.1 No alias suberin/cutin lipid exporter *(DSO) & subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Solyc11g009100 No alias ABC transporter G family member (AHRD V3.3 *** A0A0K9NWI5_ZOSMR) 0.06 Orthogroups_2024-Update
Sopen01g047930 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 327 538
IPR003439 ABC_transporter-like 32 180
No external refs found!