Sopen01g048480

Description : PsbP

Gene families : OG_42_0006238 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006238_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g048480
Cluster	HCCA clusters: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
Bradi4g04640	No alias	Photosystem II reaction center PsbP family protein	0.03	Orthogroups_2024-Update
Cre08.g362900	No alias	Photosystem II reaction center PsbP family protein	0.02	Orthogroups_2024-Update
GRMZM6G924006	No alias	Photosystem II reaction center PsbP family protein	0.03	Orthogroups_2024-Update
MA_81231g0010	No alias	(at4g15510 : 288.0) Photosystem II reaction center PsbP...	0.02	Orthogroups_2024-Update
Seita.3G333700.1	No alias	protein involved in PS-I assembly *(PPD1)	0.03	Orthogroups_2024-Update
Sobic.008G131700.2	No alias	protein involved in PS-I assembly *(PPD1)	0.05	Orthogroups_2024-Update
Solyc01g106090	No alias	PsbP-domain protein 1 (AHRD V3.3 *** A0A0F7GZA5_9ROSI)	0.1	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	InterProScan predictions
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	InterProScan predictions
CC	GO:0019898	extrinsic component of membrane	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002683	PsbP	106	281

External Links

No external refs found!