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  5. Sopen02g005870

Sopen02g005870


Description : Gelsolin repeat


Gene families : OG_42_0000618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g005870
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_05742 No alias villin-4 0.02 Orthogroups_2024-Update
Bradi2g35467 No alias villin-like 1 0.02 Orthogroups_2024-Update
Glyma.09G057400 No alias villin 4 0.03 Orthogroups_2024-Update
HORVU3Hr1G108110.26 No alias villin actin-crosslinking factor 0.04 Orthogroups_2024-Update
HORVU3Hr1G113850.2 No alias villin actin-crosslinking factor 0.02 Orthogroups_2024-Update
LOC_Os03g24220 No alias villin protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00009538-RA No alias (at2g41740 : 416.0) Encodes a protein with high homology... 0.03 Orthogroups_2024-Update
PSME_00035890-RA No alias (at2g41740 : 258.0) Encodes a protein with high homology... 0.02 Orthogroups_2024-Update
Sobic.003G427600.1 No alias villin actin-crosslinking factor 0.03 Orthogroups_2024-Update
Solyc02g021420 No alias villin 4 (AHRD V3.3 *** AT4G30160.4) 0.03 Orthogroups_2024-Update
evm.model.tig00001366.21 No alias (at3g57410 : 107.0) Encodes a protein with high homology... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA InterProScan predictions
BP GO:0007010 cytoskeleton organization IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 266 337
IPR007123 Gelsolin-like_dom 31 111
IPR007123 Gelsolin-like_dom 150 203
IPR007123 Gelsolin-like_dom 638 709
IPR003128 Villin_headpiece 938 973
No external refs found!