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  5. Solyc01g110800

Solyc01g110800


Description : Small auxin up-regulated RNA19


Gene families : OG_42_0000038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000038_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g110800
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
A4A49_07731 No alias indole-3-acetic acid-induced protein arg7 0.03 Orthogroups_2024-Update
Glyma.06G278300 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.06G280400 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.06G281000 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.06G281700 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.08G155300 No alias SAUR-like auxin-responsive protein family 0.02 Orthogroups_2024-Update
Glyma.09G220200 No alias SAUR-like auxin-responsive protein family 0.04 Orthogroups_2024-Update
Glyma.12G124900 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
MA_10901g0010 No alias (at4g34760 : 98.2) SAUR-like auxin-responsive protein... 0.02 Orthogroups_2024-Update
MA_8179811g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.002G024300 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Potri.009G127400 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Potri.009G127700 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Potri.013G111000 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Potri.T144000 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Sopen01g052780 No alias Auxin responsive protein 0.02 Orthogroups_2024-Update
Sopen01g053050 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003676 SAUR_fam 11 82
No external refs found!